1. Computational study of the HLTF ATPase remodeling domain suggests its activity on dsDNA and implications in damage toleranceMartin Ljubič, Claudia D'Ercole, Yossma Waheed, Ario De Marco, Jure Borišek, Matteo De March, 2024, original scientific article Keywords: DNA repairing mechanism, protein modeling, chromatin remodeler, helicase-like transcription factor Published in RUNG: 15.11.2024; Views: 378; Downloads: 1 Full text (5,17 MB) |
2. New achievements in orbital angular momentum beam characterization using a Hartmann wavefront sensor and the Kirkpatrick-Baez active optical system KAOSLuka Novinec, Matteo Pancaldi, Flavio Capotondi, Giovanni De Ninno, Francesco Guzzi, George Kourousias, Emanuele Pedersoli, Barbara Ressel, Benedikt Rösner, Alberto Simoncig, 2024, original scientific article Abstract: Advances in physics have been significantly driven by state-of-the-art technology, and in photonics and X-ray science this calls for the ability to manipulate the characteristics of optical beams. Orbital angular momentum (OAM) beams hold substantial promise in various domains such as ultra-high-capacity optical communication, rotating body detection, optical tweezers, laser processing, super-resolution imaging etc. Hence, the advancement of OAM beam-generation technology and the enhancement of its technical proficiency and characterization capabilities are of paramount importance. These endeavours will not only facilitate the use of OAM beams in the aforementioned sectors but also extend the scope of applications in diverse fields related to OAM beams. At the FERMI Free-Electron Laser (Trieste, Italy), OAM beams are generated either by tailoring the emission process on the undulator side or, in most cases, by coupling a spiral zone plate (SZP) in tandem with the refocusing Kirkpatrick–Baez active optic system (KAOS). To provide a robust and reproducible workflow to users, a Hartmann wavefront sensor (WFS) is used for both optics tuning and beam characterization. KAOS is capable of delivering both tightly focused and broad spots, with independent control over vertical and horizontal magnification. This study explores a novel non-conventional `near collimation' operational mode aimed at generating beams with OAM that employs the use of a lithographically manufactured SZP to achieve this goal. The article evaluates the mirror's performance through Hartmann wavefront sensing, offers a discussion of data analysis methodologies, and provides a quantitative analysis of these results with ptychographic reconstructions. Keywords: tailored photonics beams, orbital angular momentum of light, wavefront sensing, ptychography Published in RUNG: 19.08.2024; Views: 1069; Downloads: 4 Full text (10,31 MB) This document has many files! More... |
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4. A practical guide for the quality evaluation of fluobodies/chromobodiesUrša Štrancar, Claudia D'Ercole, Lucia Cikatricisová, Mirna Nakić, Matteo De March, Ario De Marco, 2024, original scientific article Keywords: fluorescent proteins, protein stability, protein degradation Published in RUNG: 16.05.2024; Views: 1193; Downloads: 7 Full text (667,85 KB) This document has many files! More... |
5. Biological applications of synthetic binders isolated from a conceptually new adhiron libraryClaudia D'Ercole, Matteo De March, Gianluca Veggiani, Sandra Oloketuyi, Rossella Svigelj, Ario De Marco, 2023, original scientific article Keywords: synthetic library, adhirons, affimers, C-reactive protein, SpyCatcher Published in RUNG: 17.10.2023; Views: 1843; Downloads: 4 Full text (2,23 MB) This document has many files! More... |
6. UHECR arrival directions in the latest data from the original Auger and TA surface detectors and nearby galaxiesA. di Matteo, Andrej Filipčič, Jon Paul Lundquist, Samo Stanič, Serguei Vorobiov, Danilo Zavrtanik, Marko Zavrtanik, Lukas Zehrer, 2022, published scientific conference contribution Abstract: The distribution of ultra-high-energy cosmic-ray arrival directions appears to be nearly isotropic except for a dipole moment of order 6×(E/10 EeV) per cent. Nonetheless, at the highest energies, as the number of possible candidate sources within the propagation horizon and the magnetic deflections both shrink, smaller-scale anisotropies might be expected to emerge. On the other hand, the flux suppression reduces the statistics available for searching for such anisotropies. In this work, we consider two different lists of candidate sources: a sample of nearby starburst galaxies and the 2MRS catalog tracing stellar mass within 250 Mpc.
We combine surface-detector data collected at the Pierre Auger Observatory until 2020 and the Telescope Array until 2019, and use them to test models in which UHECRs comprise an isotropic background and a foreground originating from the candidate sources and randomly deflected by magnetic fields. The free parameters of these models are the energy threshold, the signal fraction, and the search angular scale.
We find a correlation between the arrival directions of 11.8%+5.0%−3.1% of cosmic rays detected with E≥38 EeV by Auger or with E≳49 EeV by TA and the position of nearby starburst galaxies on a 15.5∘+5.3∘−3.2∘ angular scale, with a 4.2σ post-trial significance, as well as a weaker correlation with the overall galaxy distribution. Keywords: Pierre Auger Observatory, Telescope Array, indirect detection, surface detection, ground array, ultra-high energy, cosmic rays, anisotropy, full-sky, starburst galaxies, source correlations, dipole Published in RUNG: 04.10.2023; Views: 1969; Downloads: 5 Full text (2,53 MB) This document has many files! More... |
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9. Giant and tunable out-of-plane spin polarization of topological antimonenePolina M. Sheverdyaeva, Conor Hogan, Gustav Bihlmayer, Jun Fujii, Ivana Vobornik, Matteo Jugovac, Asish K. Kundu, Sandra Gardonio, Zipporah Rini Benher, Giovanni di Santo, 2023, original scientific article Keywords: density functional theory, spin-resolved ARPES, electronic structure, topological insulators, 2D materials, antimonene Published in RUNG: 18.07.2023; Views: 1961; Downloads: 5 Full text (4,26 MB) This document has many files! More... |
10. Macroporous epoxy-based monoliths functionalized with anti-CD63 nanobodies for effective isolation of extracellular vesicles in urineJulia Neumair, Claudia D'Ercole, Matteo De March, Martin Elsner, Michael Seidel, Ario De Marco, 2023, original scientific article Keywords: extracellular vesicles, monolith chromatography, nanobodies, functionalitazion strategies Published in RUNG: 27.03.2023; Views: 2454; Downloads: 14 Full text (2,20 MB) |