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41.
The finite size effects and two-state paradigm of protein folding
Artem Badasyan, Matjaž Valant, Jože Grdadolnik, Vladimir N. Uversky, 2021, original scientific article

Abstract: The coil to globule transition of the polypeptide chain is the physical phenomenon behind the folding of globular proteins. Globular proteins with a single domain usually consist of about 30 to 100 amino acid residues, and this finite size extends the transition interval of the coil-globule phase transition. Based on the pedantic derivation of the two-state model, we introduce the number of amino acid residues of a polypeptide chain as a parameter in the expressions for two cooperativity measures and reveal their physical significance. We conclude that the k2 measure, defined as the ratio of van ’t Hoff and calorimetric enthalpy is related to the degeneracy of the denatured state and describes the number of cooperative units involved in the transition; additionally, it is found that the widely discussed k2=1 is just the necessary condition to classify the protein as the two-state folder. We also find that Ωc, a quantity not limited from above and growing with system size, is simply proportional to the square of the transition interval. This fact allows us to perform the classical size scaling analysis of the coil-globule phase transition. Moreover, these two measures are shown to describe different characteristics of protein folding
Keywords: protein folding, two-state model, size scaling, thermodynamic cooperativity
Published in RUNG: 24.02.2021; Views: 2086; Downloads: 65
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42.
43.
Environmentally Friendly Films Combining Bacterial Cellulose, Chitosan, and Polyvinyl Alcohol: Effect of Water Activity on Barrier, Mechanical, and Optical Properties
Patricia Cazón, Manuel Vazquez, Gonzalo Velazquez, 2019, original scientific article

Abstract: The interest in developing new materials intended for food packaging based on bacterial cellulose is growing in the recent years. Flexible and transparent films from bacterial cellulose-chitosan-polyvinyl alcohol have shown excellent UV-barrier properties. However, this composite material interacts with ambient moisture modifying its water activity due to its hydrophilic nature. In this work, an extensive study was carried out to evaluate the changes in the properties of these films as a function of water activity. Moisture adsorption isotherm were described by the GAB method. Results showed the plasticizing effect of water molecules increasing the water vapour permeability of the samples from 1.86·10-12 to 1.17·10-11 g/m·s·Pa, the percentage of elongation from 3.25 to 36.55% and the distance to burst from 0.64 to 5.12 mm. The increase of the water activity dropped the tensile strength values from 74.76 to 38.56 MPa, Young’s modulus values from 3133.46 to 30.71 MPa and burst strength to 703.87 g. The values of the UV-barrier were maintained at the wide range of water activity. Consequently, water molecules do not affect the UV-barrier properties of the films.
Keywords: GAB model, moisture adsorption isotherms, plasticization, bacterial cellulose, mechanical properties, UV-barrier properties, moisture content
Published in RUNG: 09.12.2020; Views: 2469; Downloads: 0
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44.
Bacterial cellulose films: Evaluation of the water interaction
Patricia Cazón, Gonzalo Velazquez, Manuel Vazquez, 2020, original scientific article

Abstract: Bacterial cellulose is a biopolymer that is gaining attention due to its 3D structure, higher purity, porosity and surface area. However, this material can interact with water molecules from the surrounding environment, resulting in alterations of its properties. Hence, the purpose of this study was to analyze the modifications on the mechanical, water vapor permeability and optical properties of bacterial cellulose films as a function of the water activity. Results indicated that water acted as a plasticizer, mainly affecting mechanical and water vapor permeability properties. The moisture adsorption isotherms allowed predicting the moisture content of the bacterial cellulose films at several relative humidity conditions. Values for tensile strength and burst strength ranged from 15.50 to 22.28 MPa and from 145.03–338.10 g, respectively. The elongation and the distance to burst ranged from 1.36 to 3.71 % and from 0.39 to 1.86 mm, respectively. These values increased due to the plasticizing effect of the water molecules. Water vapor permeability values ranged from 1.35·10−12 to 3.13·10-11 g/ m s Pa, showing a significant increase up to 0.48 of water activity. Bacterial cellulose films showed excellent UV-barrier properties in the different water activities evaluated.
Keywords: GAB model, Moisture adsorption isotherms, Bacterial cellulose, Mechanical properties, UV-barrier properties
Published in RUNG: 09.12.2020; Views: 2465; Downloads: 0
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45.
UV-protecting films based on bacterial cellulose, glycerol and polyvinyl alcohol: effect of water activity on barrier, mechanical and optical properties
Patricia Cazón, Gonzalo Velazquez, Manuel Vazquez, 2020, original scientific article

Abstract: Biodegradable films based on bacterial cellulose, glycerol and polyvinyl alcohol are a new alternative to develop food packaging with the capac- ity to retard or inhibit the effect of UV radiation. However, these compounds are sensitive to moisture. Therefore, the purpose of this study was to evaluate the modifications of the mechanical, water vapor permeability and optical properties of these composite films depending on their water activity. Results showed that water molecules acted as a plasticizer agent, modifying the mechanical, water vapor perme- ability and optical properties of the developed films. However, an overplastification process took place at higher activity water, resulting in a weakness of film structure and decreasing drastically the elongation. The transmittance in the UV–VIS light region decreased when the activity water increased. No significant variations were observed in color, trans- parency or opacity properties.
Keywords: GAB model, Moisture adsorption isotherms, Plasticization, Bacterial cellulose, Mechanical properties, UV-barrier properties
Published in RUNG: 09.12.2020; Views: 2404; Downloads: 90
.pdf Full text (552,03 KB)

46.
Večparametrski model za izbiro najugodnejše banke ali hranilnice na Goriškem
Kristina Lancner Zorzut, 2020, master's thesis

Abstract: V magistrskem delu smo se ukvarjali z vrednotenjem in izbiro najugodnejše banke ali hranilnice na Goriškem. Banke ali hranilnice nas spremljajo na vsakem koraku. Med seboj so si precej podobne, vse namreč ponujajo finančne storitve uporabniku. Vse si želijo privabiti čim več uporabnikov, zato strokovnjaki znotraj vsake posamezne finančne ustanove kreirajo in iščejo posamezne rešitve, kje in kako bi se čimbolj približali čim večji populaciji. Nekatere banke/hranilnice imajo zato nižje stroške na eni strani, druge na drugi. Prav zato smo se hoteli prepričati in sploh ugotoviti, ali obstaja najugodnejša banka/hranilnica na Goriškem ter katera je to. Vrednotenje in izbor je potekal s pomočjo večparametrske metode DEX. Po izbiri kriterijev, ki kar najboljše opišejo delovanje bank/hranilnic, smo po korakih večparametrskega modeliranja izdelali celoten model ter z njim ovrednotili in analizirali naše izbrane banke/hranilnice. Izdelali smo tudi analizo “Kaj-če?”, analizo plus/minus 1 ter analizo selektivne razlage. Končni rezultat je predlog najprimernejše banke/hranilnice. V našem primeru sta to dve: Primorska hranilnica Vipava (PHV) ter Delavska hranilnica (DH), ki sta bili ocenjeni kot ugodni hranilnici, vendar vseeno ne kot najugodnejši. Ugodni sta zato, ker sta po skoraj vseh kriterijih opredeljeni kot ugodni ali srednji. PHV je neugodna samo glede dostopnosti bančnega okenca. Za razliko od PHV je imela DH poleg tega kot neugodno ocenjeno še pridobitev kartice.
Keywords: banka, hranilnica, odločitveni model, večparametrsko odločanje, metoda DEX, program DEXi
Published in RUNG: 09.12.2020; Views: 3257; Downloads: 117
.pdf Full text (1,31 MB)

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EKONOMSKA PRIMERJAVA MODELOV FINANCIRANJA NALOŽBE PODJETJA V FOTOVOLTAIKO
Vojko Hvala, 2020, master's thesis

Abstract: Ker so se v zadnjih letih investicije v sončne elektrarne skorajda ustavile, nas je zanimalo, ali se investicija v fotovoltaiko v sedanjih razmerah, kot jo nekateri promovirajo in objubljajo, dejansko izide in ali bo kot taka v prihodnosti lahko nadomestila izpad proizvodnje električne energije pri opuščanju fosilnih goriv za zniževanje emisij s toplogrednimi plini. Glavni namen magistskega dela je bil ugotoviti, ali je naložba v fotovoltaiko v trenutnih razmerah smiselna in ekonomsko upravičena s ciljem poiskati najbolj optimalen model financiranja. Metoda dela zajema analizo praktičnega primera naložbe podjetja v fotovoltaični projekt z medsebojno primerjavo drugih modelov in načinov financiranja na osnovi izračunanih ekonomskih kazalnikov. Model izračunov je mogoče uporabiti za presojanje upravičljivosti tudi za druge solarne projekte, ki se nameravajo graditi v prihodnje. Iz ekonomske primerjave modelov financiranja smo ugotovili, da je najprimernješi model ekonomsko upravičljiv le ob upoštevanju določenih meril. Ekonomska upravičljivost investicije omogoča večjo vlogo fotovoltaike v scenariju dolgoročne politike uvajanja obnovljive in čiste energije za cilj zmanjševanja emisij s toplogrednimi plini.
Keywords: model financiranja, fotovoltaika, sončna elektrarna, naložba v fotovoltaiko
Published in RUNG: 20.07.2020; Views: 3157; Downloads: 146
.pdf Full text (2,37 MB)

49.
Prenova informacijske podpore za sistemsko ureditev področja skladiščenja in interne logistike v izbranem podjetju
Janoš Morenčič, 2020, master's thesis

Abstract: V magistrskem delu je predstavljena sistemska ureditev področja skladiščenja in interne logistike s poudarkom na prenovi poslovno informacijske rešitve za podjetje Plastik SI d.o.o. Družba, katere osnovna dejavnost je proizvodnja plastične embalaže, se je v preteklih letih soočila s težavami obravnavanega področja. Ugotovili so, da je bilo neurejeno stanje posledica številnih dejavnikov kot so: slaba prostorska organiziranost skladišč, omejena funkcionalnost informacijske rešitve, nezadostno izvajanje operativnih nalog skladiščenja in interne logistike ter v zadnjem obdobju porast aktivnosti zaradi povečanega obsega proizvodnje. Vodstvo družbe je za rešitev nastalega problema rezerviralo potrebne vire in sredstva ter postavilo jasne in končne cilje v obliki učinkovite podpore procesni funkciji skladiščenja in interne logistike. Pri tem je določilo časovni okvir za izvedbo naloge. Ker so ocenili, da je obravnavano področje kompleksno in obsežno, so nalogo opredelili kot razvojni projekt in na ta način izboljšali možnosti uspeha in doseganja pričakovanih učinkov. Namen projekta, opisanega v magistrskem delu, je bil razviti in implementirati sistemsko rešitev, ki bo temeljila na prenovljeni in nadgrajeni informacijski platformi. Poudarek je bil na upoštevanju dolgoročne vzdržnosti, da bo načrtovana rešitev omogočala kasnejšo razširljivost in morebitne nadgradnje. Rezultat projekta je učinkovita informacijska podpora za skladiščenje in interno logistiko.
Keywords: Skladišče, interna logistika, projekt, informacijski sistem, model, metodologija, agilnost.
Published in RUNG: 20.07.2020; Views: 3040; Downloads: 104
.pdf Full text (4,96 MB)

50.
Statistical mechanics of DNA-nanotube adsorption
Sh. A. Tonoyan, Davit Khechoyan, Yevgeni S. Mamasakhlisov, Artem Badasyan, 2019, other component parts

Abstract: Attraction between the polycyclic aromatic surface elements of carbon nanotubes (CNT) and the aromatic nucleotides of deoxyribonucleic acid (DNA) leads to reversible adsorption (physisorption) between the two, a phenomenon related to hybridization. We propose a Hamiltonian formulation for the zipper model that accounts for the DNA-CNT interactions and allows for the processing of experimental data, which has awaited an available theory for a decade.
Keywords: DNA-CNT physisorption, zipper model
Published in RUNG: 28.01.2020; Views: 2908; Downloads: 0
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