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1.
Green synthesis of Zeolitic Imidazolate Frameworks and their evaluation for ▫$CO_2$▫ capture in humid conditions : dissertation
Aljaž Škrjanc, 2024, doctoral dissertation

Abstract: Emissions of green-house gasses have been in the forefront of scientific research in recent decades. One of the approaches towards reducing the amount of green gas CO2 in the atmosphere is its capture and storage with subsequent conversion where pure enough CO2 can be regenerated. While CO2 capture widely utilizes two mature technologies, amine absorption and cryogenic distillation, they both have significant downsides, in either cost or potential new danger to the environment. To that end an adsorption-based CO2 capture has seen quite a lot of interest in recently. Nanoporous materials have been extensively studied for this application, starting with zeolites, followed by aluminophosphates and also the new members of the porous materials group, the so called reticular porous materials. Metal-Organic Frameworks (MOFs), the first discovered reticular porous materials have shown very promising results for post combustion CO2 capture and recently also for in-door and direct air capture. MOFs are in general enough thermally stable for CO2 capture, their main weakness for wide applicability is sometimes lower selectivity for CO2 in real gas mixtures and lower stability in humid conditions. Zeolitic imidazolate frameworks (ZIFs), a subgroup of MOFs, have in recent years been extensively studied for sorption applications, also CO2, due to their superior stability and kinetics for vapour/gas adsorption if compared to carboxylate-based MOFs. While extensively studied, an overview of articles shows that most research is limited to a limited set group of frameworks, with ZIF-8 being used in more than half of ZIF papers. While ZIF-8 has successfully been prepared in water and even in solvent-free conditions, the rest of the ZIFs synthesis still heavily rely on solvothermal synthesis with formamide based solvent systems and synthesis times upwards of 5 days. Even in the case of ZIF-8, while greener synthesis approaches are available, dimethylformamide (DMF) synthesis still prevails in the cases tested for CO2 capture, mainly due to the increased CO2 uptake resulting from the synergistic contribution of the remaining DMF solvent in the pores. The goal of this thesis was to develop green synthesis approaches, both solvothermal and mechanochemical, for known ZIFs and then to extend the scope towards preparation of new ZIF materials. The goal for latter was to experimentally determine the optimal topology and functionality of ZIFs for CO2 adsorption in humid conditions. Model humid gas isotherms were developed and measured for a series of ZIFs with mostly SOD (sodalite) and RHO framework topologies and Zn and Ni as metal nodes. Finally, some novel bio-based binder materials were tested for the use with ZIFs. The sorption tests revealed than the SOD topology ZIFs have high potential for CO2 sorption applications, as the adsorption is rapid and further combination of terminally functionalised imidazoles in those frameworks drastically increases the frameworks affinity for CO2 at lower pressures. With most common 4,5- functionalised imidazole having hydrophilic functional groups, the challenge of competitive water sorption still remains. On the other hand some hydrophobic 4,5-substituted sodalite ZIFs, both with 4,5-dichloroimidazole, show excellent CO2 sorption and even complete hydrophobicity. The results led us to hypothesize that further research on ZIFs- for CO2 capture has to shift form 2 substituted sodalite frameworks to 4,5 substituted frameworks with strongly dipolar hydrophobic groups. The hydrophilic polar groups currently in use lead to issues with competitive water adsorption, due to their potential to form hydrogen bonds with water. Furthermore, some new agar and alginate based shaping methods were tested, as both potential binders are not environmentally toxic and are already used on the industrial scale world-wide for other applications.
Keywords: carbon capture, synthesis, metal-organic frameworks, zeolitic imidazolate frameworks, nanoporous materials, dissertations
Published in RUNG: 10.09.2024; Views: 383; Downloads: 14
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2.
Hydrazone-linked covalent organic framework catalyst via efficient Pd recovery from wastewater
Mahira Bashri, Sushil Kumar, Pallab Bhandari, Sasi Stephen, Matthew J. O'Connor, Safa Gaber, Tina Škorjanc, Matjaž Finšgar, Gisha Elizabeth Luckachan, Blaž Belec, 2024, original scientific article

Abstract: Global consumption and discharge of palladium (Pd) have raised environmental concerns but also present an opportunity for the sustainable recovery and reuse of this precious metal. Adsorption has proven to be an efficient method for the selective recovery of Pd from industrial wastewater. This study investigated a hydrazone-linked covalent organic framework (Tfpa-Od COF) as a potential material for the high-affinity adsorption of Pd2+ ions from wastewater, achieving a Kd value of 3.62 × 106 mL g–1. The electron-rich backbone of the COF contributes to its excellent selective removal efficiency (up to 100%) and adsorption capacity of 372.59 mg g–1. Furthermore, the Pd-adsorbed COF was evaluated as a sustainable catalyst for the Suzuki–Miyaura coupling reaction, demonstrating good catalytic conversion and recyclability. This work attempts to showcase a protocol for reusing waste palladium generated in water to fabricate heterogeneous catalysts and, thereby, promote the circular economy concept.
Keywords: covalent organic frameworks, sustainability, catalysis, palladium adsorption, water purification
Published in RUNG: 22.08.2024; Views: 411; Downloads: 4
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3.
Strategies to overcome particle size limitations in covalent organic frameworks for bioimaging and delivery : lecture at the 9th International Conference on Metal-Organic Frameworks and Open Framework Compounds (MOF2024), Singapore, 15th-19th July 2024
Tina Škorjanc, 2024, unpublished conference contribution

Abstract: Particle size is an important physical parameter in any nanomaterial designed for biomedical applications. It critically influences the biological fate of nanoparticles. It is generally believed that a range between 10 and 200 nm is most relevant to physical and biochemical targeting through both intravascular and site-specific deliveries.1 High porosity, purely organic nature, structural tunability and the ability to gradually release therapeutically-relevant cargo have rendered covalent organic frameworks (COFs) promising materials in biomedical research. While several COF-based drug delivery systems have been reported, particle aggregation and the associated particle size pose a significant barrier to real-life implementation of these systems.2 In the current talk, two strategies to address these issues will be presented as they have been applied to biosensing and delivery applications. Firstly, prolonged ultrasonication has proven an effective method of reducing the COF particle size while maintaining the material’s chemical properties.3 A fluorescent COF, that was post-synthetically modified to incorporate a hypoxia-targeting nitroimidazole moiety, was exposed to prolonged ultrasonication which effectively reduced the particle size from several µm to <170 nm.4 The ultrasonication treatment did not significantly hamper the material’s physical or chemical properties, such as crystallinity, and it even enhanced its fluorescence signal by overcoming aggregation-caused quenching (ACQ). The material and its constituent building blocks were shown to have minimal or no cytotoxicity. The COF’s internalization was monitored by fluorescence spectroscopy, and it preferentially accumulated in cells exposed to hypoxic environment, thus serving as a fluorescent biosensor for hypoxia. Another strategy of limiting the COF particle size is to grow the material on nano-sized substrates. Silver nanowires (AgNWs) have been shown as effective intracellular sensors5 and single-cell endoscopic tools.6 We have prepared AgNWs with diameters below 200 nm and have employed various synthetic methods to coat them with thiol-functionalized COFs. Favorable coordination bonds that form between Ag and the thiol functional group in the COF linkers drive the assembly process. Both bottom-up synthetic approaches, where the COF is grown on the surface of AgNWs, and top-down strategies, where pre-synthesized COF particles are attached onto AgNWs surface have been successful. The inorganic-organic hybrid materials were characterized by various techniques, including electron microscopy, Fourier-transform infrared spectroscopy, thermogravimetric analysis, and powder X-ray diffraction. All characterizations combined suggest that the diameter of the COF-coated AgNWs remains well in the nanometer-size regime. References: (1) Hickey, J. W.; Santos, J. L.; Williford, J.-M.; Mao, H.-Q. Control of Polymeric Nanoparticle Size to Improve Therapeutic Delivery. J. Control. Release 2015, 219, 536–547. (2) Esrafili, A.; Wagner, A.; Inamdar, S.; Acharya, A. P. Covalent Organic Frameworks for Biomedical Applications. Adv. Healthc. Mater. 2021, 10 (6), 2002090. (3) Skorjanc, T.; Heinrich, J.; Makuc, D.; Kulak, N.; Valant, M. Sustained Delivery of Cu(II)-Based DNA Intercalators by Nanometer-Sized Cyclodextrin-Based Porous Polymers. ACS Appl. Nano Mater. 2023, 6 (22), 21162–21168. (4) Skorjanc, T.; Shetty, D.; Kumar, S.; Makuc, D.; Mali, G.; Volavšek, J.; Bergant Marušič, M.; Valant, M. Nitroreductase-Sensitive Fluorescent Covalent Organic Framework for Tumor Hypoxia Imaging in Cells. Chem. Commun. 2023, 59 (38), 5753–5756. (5) Zhang, Q.; Inose, T.; Ricci, M.; Li, J.; Tian, Y.; Wen, H.; Toyouchi, S.; Fron, E.; Ngoc Dao, A. T.; Kasai, H.; Rocha, S.; Hirai, K.; Fortuni, B.; Uji-i, H. Gold-Photodeposited Silver Nanowire Endoscopy for Cytosolic and Nuclear PH Sensing. ACS Appl. Nano Mater. 2021, 4 (9), 9886–9894. (6) Ricci, M.; Fortuni, B.; Vitale, R.; Zhang, Q.; Fujita, Y.; Toyouchi, S.; Lu, G.; Rocha, S.; Inose, T.; Uji-I, H. Gold-Etched Silver Nanowire Endoscopy: Toward a Widely Accessible Platform for Surface-Enhanced Raman Scattering-Based Analysis in Living Cells. Anal. Chem. 2021, 93 (12), 5037–5045.
Keywords: covalent organic frameworks, imaging, delivery, nanoendoscopy, nanowire
Published in RUNG: 22.07.2024; Views: 609; Downloads: 2
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4.
A porous organic polymer for synergistic light-triggered NO release and anticancer drug delivery : lecture at the iCeMS Retreat 2024, Kobe, Japan, 4. 7. 2024
Tina Škorjanc, 2024, unpublished conference contribution

Abstract: Treatment of biologically complex diseases, such as cancer, can significantly benefit from combination therapies. These powerful therapies are able to simultaneously target different biological targets, thereby overcoming or reducing drug resistance, decreasing dose-related toxicity, and potentially exhibiting synergistic effects. Herein, we combine the effects of nitric oxide (NO) gas therapy and an anticancer drug Doxorubicin (Dox) using a porous organic polymer (POP) as a delivery vehicle for both. SH-POP, synthesized by a facile, room-temperature method, is rich in both thiol (-SH) and secondary amine (R-NH-R’) functional groups, which can be post-synthetically nitrosylated in a room-temperature reaction that uses water as a solvent, yielding SNO-POP. Fourier-transform infrared (FT-IR) and Raman spectroscopy confirm that both types of functional groups are nitrosylated. Upon white light irradiation, SNO-POP releases up to ~60 µmol of NO per g, and exhibits reversible switch on – switch off NO release behavior triggered by simple light irradiation for at least 20 cycles. Unlike many conventional systems, where a known small-molecule NO donor is incorporated into the pores, here, the porous polymer itself serves as a NO donor, so the pores remain available for the encapsulation of another therapeutic, i.e. Dox. The release of Dox from the Dox@SNO-POP system is pH-sensitive and occurs preferentially in a slightly acidic environment (pH = 5.4). HeLa cancer cell viability studies confirm an enhancement in toxicity that can be ascribed to the synergistic effects of light-triggered NO release and pH-triggered Dox release. Confocal microscopy imaging reveals the presence of both species inside cells. This study is expected to stimulate the development of porous polymers as potent vehicles for combination therapies in cancer treatment and beyond.
Keywords: porous organic polymer, nitric oxide, combination therapy, synergistic therapy, chemotherapy
Published in RUNG: 05.07.2024; Views: 503; Downloads: 2
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5.
Covalent-organic frameworks for luminescent sensors
Tina Škorjanc, Matjaž Valant, 2024, independent scientific component part or a chapter in a monograph

Abstract: In summary, this chapter discussed the richness of COFs that have been utilized in luminescence-based sensing of various analytes. Literature reports were classified based on the analyte type and a section was dedicated to each explosive compounds, metal cations, biological molecules, pH, VOCs, amines and water, anions, and enantiomers. Different design strategies implemented to develop sensors for each analyte were highlighted as were the detection mechanisms and key parameters of the performance, such as LODs. In comparison to the state-of-the-art prior to 2020, we note several changes in the most recent developments of luminescent COF sensors.
Keywords: ensors, covalent organic frameworks, fluorescence, biosensor, explosives
Published in RUNG: 01.07.2024; Views: 563; Downloads: 2
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6.
Summertime particulate matter and its composition in Greece
M. A. Tsiflikiotou, E. Kostenidou, D. K. Papanastasiou, D. Patoulias, Pavlos Zarmpas, D. Paraskevopoulou, E. Diapouli, Christos Kaltsonoudis, Kalliopi Florou, Iasonas Stavroulas, 2019, original scientific article

Abstract: During the summer of 2012 a coordinated field campaign was conducted in multiple locations in Greece in order to characterize the ambient particulate matter (PM) levels, its chemical composition and the contribution of the regional and local sources. PM1, PM2.5 and PM10 samples were collected simultaneously at seven different sites in Greece: an urban and a suburban station in Patras, a suburban station in Thessaloniki, a suburban and an urban background station in Athens, a rural background station at the Navarino Environmental Observatory (NEO) in southwestern Peloponnese and a remote background site at Finokalia in the northeastern part of Crete. The sites were selected to facilitate the estimation of the contribution of the local emission sources and long range transport. Sulfate and organics were the major PM1 components in all sites suggesting that high sulfate levels still remain in parts of Europe. The photochemistry of the Eastern Mediterranean can convert rapidly the emitted sulphur dioxide to sulfate. Our analysis indicated significant sulfate production over the area, with high sulfate levels, especially in the remote site of Finokalia, associated with air masses that had passed over Turkey. There was high regional secondary organic aerosol production dominating organic aerosol levels even in a major city like Athens. High organic aerosol levels were associated with air masses that had crossed the Balkans with a significant biogenic component. The average PM2.5 concentration ranged from 13 to 18 μg m−3 in the different sites. There were unexpected significant gradients in the concentrations of secondary aerosol components in length scales of a few hundred kilometers. The low concentrations of measured PM2.5 nitrate are mostly organic nitrates and supermicrometer nitrate associated with sea-salt and dust. Dust was a significant PM10 constituent in all areas and was quite variable in space showing the importance of the local sources.
Keywords: PM2.5, sulfate aerosol, secondary inorganic aerosol, secondary organic aerosol, Greece
Published in RUNG: 13.05.2024; Views: 628; Downloads: 0
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7.
Sources and processes that control the submicron organic aerosol composition in an urban Mediterranean environment (Athens) : a high temporal-resolution chemical composition measurement study
Iasonas Stavroulas, Aikaterini Bougiatioti, Georgios Grivas, D. Paraskevopoulou, M. Tsagkaraki, Pavlos Zarmpas, Eleni Liakakou, Evangelos Gerasopoulos, Nikolaos Mihalopoulos, 2019, original scientific article

Abstract: Submicron aerosol chemical composition was studied during a year-long period (26 July 2016–31 July 2017) and two wintertime intensive campaigns (18 December 2013–21 February 2014 and 23 December 2015–17 February 2016), at a central site in Athens, Greece, using an Aerosol Chemical Speciation Monitor (ACSM). Concurrent measurements included a particle-into-liquid sampler (PILS-IC), a scanning mobility particle sizer (SMPS), an AE-33 Aethalometer, and ion chromatography analysis on 24 or 12 h filter samples. The aim of the study was to characterize the seasonal variability of the main submicron aerosol constituents and decipher the sources of organic aerosol (OA). Organics were found to contribute almost half of the submicron mass, with 30 min resolution concentrations during wintertime reaching up to 200 µg m−3. During winter (all three campaigns combined), primary sources contributed about 33 % of the organic fraction, and comprised biomass burning (10 %), fossil fuel combustion (13 %), and cooking (10 %), while the remaining 67 % was attributed to secondary aerosol. The semi-volatile component of the oxidized organic aerosol (SV-OOA; 22 %) was found to be clearly linked to combustion sources, in particular biomass burning; part of the very oxidized, low-volatility component (LV-OOA; 44 %) could also be attributed to the oxidation of emissions from these primary combustion sources. These results, based on the combined contribution of biomass burning organic aerosol (BBOA) and SV-OOA, indicate the importance of increased biomass burning in the urban environment of Athens as a result of the economic recession. During summer, when concentrations of fine aerosols are considerably lower, more than 80 % of the organic fraction is attributed to secondary aerosol (SV-OOA 31 % and LV-OOA 53 %). In contrast to winter, SV-OOA appears to result from a well-mixed type of aerosol that is linked to fast photochemical processes and the oxidation of primary traffic and biogenic emissions. Finally, LV-OOA presents a more regional character in summer, owing to the oxidation of OA over the period of a few days.
Keywords: ACSM, organic aerosol, PMF, source apportionment
Published in RUNG: 13.05.2024; Views: 672; Downloads: 5
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8.
Yearlong measurements of monoterpenes and isoprene in a Mediterranean city (Athens) : natural vs anthropogenic origin
Anastasia Panopoulou, Eleni Liakakou, Stéphane Sauvage, Valérie Gros, Nadine Locoge, Iasonas Stavroulas, Bernard Bonsang, Evangelos Gerasopoulos, Nikolaos Mihalopoulos, 2020, original scientific article

Abstract: Monoterpenes and isoprene are important constituents of the volatile organic compounds (VOCs) due to their high reactivity and participation in ozone and secondary aerosol formation. The current work focuses on the results of a 13-month intensive campaign of high resolution time-resolved measurements of these compounds, at an urban background site in Athens, Greece. On an annual basis, monoterpenes (α-pinene and limonene) surpass the isoprene levels presenting mean values of 0.70 ± 0.83 μg m−3, 0.33 ± 0.78 μg m−3 and 0.19 ± 0.36 μg m−3, respectively. The large standard deviation highlights the significant diurnal and day-to-day variability. Isoprene presents a typical seasonal cycle, with a photochemically induced summer-time maximum. Enhanced noon levels are observed during summer, whereas a morning peak in the autumn and winter profiles occurs, despite the generally low levels encountered during these seasons. The monoterpenes deviate from the expected biogenic pattern, presenting higher mean levels during the cold period and a night-to-early morning enhancement strongly related to local anthropogenic tracers such as BC, CO, NO or toluene, as well as increased levels under wind speeds lower than 3 m s−1. Estimations of the anthropogenic and biogenic fractions based on the enhancement ratios of α-pinene versus a variety of anthropogenic tracers, demonstrate a clear dominance of the anthropogenic sources in all studied seasons. Simultaneously, the biogenic fraction increased during summer relative to winter by more than 10 times. Both α-pinene and limonene significantly contribute to locally formed secondary organic aerosol (SOA), determined by means of an ACSM, accounting for at least 22% and 13% of their levels in summer and winter respectively. Additionally, monoterpenes and isoprene contribute 6% to the observed oxidants levels (O3 + NOx) during summer.
Keywords: volatile organic compounds, biogenic compounds, monoterpenes, isoprene, Athens
Published in RUNG: 10.05.2024; Views: 604; Downloads: 4
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9.
10.
Long-term brown carbon spectral characteristics in a Mediterranean city (Athens)
Eleni Liakakou, Dimitris G. Kaskaoutis, Georgios Grivas, Iasonas Stavroulas, M. Tsagkaraki, D. Paraskevopoulou, Aikaterini Bougiatioti, Umesh Chandra Dumka, Evangelos Gerasopoulos, Nikolaos Mihalopoulos, 2020, original scientific article

Abstract: This study analyses 4-years of continuous 7-λ Aethalometer (AE-33) measurements in an urban-background environment of Athens, to resolve the spectral absorption coefficients (babs) for black carbon (BC) and brown carbon (BrC). An important BrC contribution (23.7 ± 11.6%) to the total babs at 370 nm is estimated for the period May 2015–April 2019, characterized by a remarkable seasonality with winter maximum (33.5 ± 13.6%) and summer minimum (18.5 ± 8.1%), while at longer wavelengths the BrC contribution is significantly reduced (6.8 ± 3.6% at 660 nm). The wavelength dependence of the total babs gives an annual-mean AAE370-880 of 1.31, with higher values in winter night-time. The BrC absorption and its contribution to babs presents a large increase reaching up to 39.1 ± 13.6% during winter nights (370 nm), suggesting residential wood burning (RWB) emissions as a dominant source for BrC. This is supported by strong correlations of the BrC absorption with OC, EC, the fragment ion m/z 60 derived from ACSM and PMF-analyzed organic fractions related to biomass burning (e.g. BBOA). In contrast, BrC absorption decreases significantly during daytime as well as in the warm period, reaching to a minimum during the early-afternoon hours in all seasons due to photo-chemical degradation. Estimated secondary BrC absorption is practically evident only during winter night-time, implying the fast oxidation of BrC species from RWB emissions. Changes in mixing-layer height do not significantly affect the BrC absorption in winter, while they play a major role in summer.
Keywords: spectral aerosol absorption, brown carbon, wood burning, organic aerosols, chemical composition, Athens
Published in RUNG: 10.05.2024; Views: 758; Downloads: 2
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