11. Physics behind the Conformational Transitions in Biopolymers. Demystification of DNA melting and Protein FoldingArtem Badasyan, invited lecture at foreign university Abstract: Biophysics is the area of research, devoted to the studies of physical problems related to living systems. Animal cell is the smallest unit of an organism and mainly contains water solutions of structurally inhomogeneous polymers of biological origin: polypeptides (proteins) and polynucleotides (DNA, RNA). Statistical physics of macromolecules allows to describe the conformations of both synthetic and bio-polymers and constitutes the basis of Biophysics. During the talk I will report on the biophysical problems I have solved with numerical simulations (Langevin-based Molecular Dynamics of Go-like protein folding model and Monte Carlo with Wang-Landau sampling) and analytical studies of spin models (formula evaluation by hand, enforced with computer algebra systems). The direct connections with the theory of phase transitions, algebra of non-commutative operators and decorated spin models will be elucidated.
Keywords: Biophysics, protein folding, helix-coil transition, spin models
Published in RUNG: 13.12.2016; Views: 5798; Downloads: 0
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12. Extension of the measurement of the proton-air cross section with the Pierre Auger ObservatoryRalf Ulrich, Andrej Filipčič, Gašper Kukec Mezek, Ahmed Saleh, Samo Stanič, Marta Trini, Darko Veberič, Serguei Vorobiov, Lili Yang, Danilo Zavrtanik, Marko Zavrtanik, 2015, published scientific conference contribution Abstract: With hybrid data of the Pierre Auger Observatory it is possible
to measure the cross section of proton-air collisions at
energies far beyond the reach of the LHC. Since the first
measurement by the Pierre Auger Collaboration the event
statistics has increased significantly. The proton-air
cross section is now estimated in the two energy intervals in
lg(E/eV) from 17.8 to 18 and from 18 to 18.5. These energies
are chosen so that they maximise the available event statistics
and at the same time lie in the region most compatible with a
significant primary proton fraction. Of these data, only the
20% of most proton-like events are considered for the
measurement. Furthermore, with a new generation of hadronic
interaction models which have been tuned to LHC data, the
model-dependent uncertainties of the measurement are re-visited.
Keywords: Pierre Auger Observatory, extensive air showers, proton-air cross section, hadronic interaction models
Published in RUNG: 03.03.2016; Views: 4544; Downloads: 196
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